An kinetic scheme is developed to solve the Baer-Nunziato model of compressible two-phase flows.Based on the kinetic theory,the conservative flux function of the model were split by the movement of micro-particles.A well-balance condition is then introduced to determined the numerical scheme of non-conservative terms.Thus both the conservative and nonconservative terms were discreted in the same manner.A number of numerical results show the robustness and good resolution of the new scheme.