Genome mining and structural characterization of sactipeptides,a class of ribosomally synthesized an

来源 :第五届中国计算蛋白质组学研讨会 | 被引量 : 0次 | 上传用户:xinxinzhang2
下载到本地 , 更方便阅读
声明 : 本文档内容版权归属内容提供方 , 如果您对本文有版权争议 , 可与客服联系进行内容授权或下架
论文部分内容阅读
  Ribosomally synthesized and posttranslationally modified peptides(RiPPs)are a major class of natural products revealed by the genome sequencing efforts of the past decades.These compounds are produced in all three domains of life and possess vast structural diversity.Sactipeptides are a small but growing class of RiPPs that contain highly unusual thioether bonds bridging the sulfur of a cysteine residue with an alph-carbon of an acceptor amino acid.These peptides are stable at high temperature and to proteolysis,and many of them exhibit potent activities against various multi-drug resistant bacteria,representing promising candidates for antibiotic development.However,structural characterization of sactipeptides is challenging due to their complicated ring systems.We here report genome mining of a series of novel sactipeptides from a bacillus strain.The ring structures of these sactipeptides were revealed by an algorithm named HSEE,which is based on the automated analysis of multiple high resolution mass spectra and evaluation of a collection of predicted hypothetical structures.The resulting structures were further validated by chemical derivatization studies.
其他文献
会议
Hepatocellular carcinoma(HCC)is one of the most common cancers worldwide andremains one of the most prevailing and lethal malignancies due to low early diagnosis rate andpoor prognosis.Understanding o
会议
会议
会议
会议
会议
会议
会议
Identifying peptides with unlimited post-translational modifications(PTMs)is a challenging task in the database searching based framework.The search space expands very fast with respect to the number