香蕉束顶病毒两个DNA-U3组分的鉴定及重组分析

来源 :中国植物病理学会2014年学术年会 | 被引量 : 0次 | 上传用户:haohaohaobaichi
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本文以香蕉为研究对象,对采白海南省13个乡镇的43个BBTV香蕉样品进行PCR扩增、克隆和测序。测序结果显示一共得到101条DNA-U3全长序列(每个样品至少送2个克隆),序列比对结果说明该组分序列变异较大,同源性在81.330/0-99.99%。同时发现其中一个析,最后验证了感染了BBTV的HK002样品来源于一个病毒株系,该病毒株系含有两个序列差异较大的DNA-U3组分,且有重组发生。通过Mfi I酶切后的片段大小确定是否有重组发生,使用该方法对100个HK002的DNA-U3重组子进行酶切鉴定。Nde I酶切结果显示100个HK002样品DNA-U3克隆中包含48个Haikou2DNA-U3(HQ616075)和52个Haikou4DNA-U3(HM231314),两个组分比例大概1:1左右。通过Mfi I酶切位点鉴定获得重组子17个,重组率为17%,重组片段在DNA-U3序列的70-280nt。
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