Universal geometrical factor of protein conformations and its packing models

来源 :第二届全国统计物理与复杂系统学术会议暨第七届海峡两岸统计物理研讨会 | 被引量 : 0次 | 上传用户:sky011
下载到本地 , 更方便阅读
声明 : 本文档内容版权归属内容提供方 , 如果您对本文有版权争议 , 可与客服联系进行内容授权或下架
论文部分内容阅读
  Protein assumes specified conformations from their chemical compositions or sequences to develop biological activity and functional specificity.The corresponding three-dimensional structures are a consequence of inter-and intra-molecular interactions.It was shown that there exists a universal geometric factor of protein conformations as a consequence of energy minimization.The factor defined as the dimensionless ratio (V/A〈r〉) of the van der Waals volume V to the surface area A and average atomic radius 〈r〉 of the folded structures, for real and well-designed proteins is universal and equal to 0.491±0.005.We propose packing models for protein structures to satisfy the universal ratio.
其他文献
  This paper studies a periodic one-dimensional exclusion process composed of a driven part and a biased diffusive part in a mesoscopic limit.It is shown that
  本报告将介绍一个由液晶空间光调制器、光学成像系统、高速相机组成的光电反馈系统,在这个系统中,液晶使得出射线偏振光相对入射线偏振光产生一个相移,相机接收到的光强与入
  In this paper, we investigate the melting behaviors of Ag17Cu2 and Ag14 metallic clusters, which are generated by an isothermal Brownian-type molecular dyna
  A generalized voter model with memory mechanism is introduced where the memory effect is characterized by $r$ memory elements and merged to the update rule
  The formation of consensus in social networks has always been an interesting topic in sociology studies.Understanding the way that consensus emerges in soci
  The equilibrium states associated with the local majority-rule are divided into three classes, the states of system-wide coordination, the trapped states, a
  Generally, strong intracycle memory is evident from the profile of the sunspot numbers and hence forecasting activities within an ongoing cycle is successfu
  Bleher, Ott and Grebogi found numerically an interesting chaotic phenomenon in 1989 for the scattering of a particle in a plane from a potential field with
  以一类包含离子通道效应的神经元模型在二维空间构建规则网络,研究神经元网络中各类螺旋波的形成过程和诱发机制.1)以分布式电流刺激网络中神经元,发现在一定条件下,网络中
  Financial markets are dynamic systems with complex interactions, which share common features in various aspects with those in traditional physics.In recent