A panzootic in praying mantid species Tenodera sinensis and Statilia maculate, caused by Beauveria bassiana, occurred in north, southwest and southeast regions of Anhui Province,eastern China in Autumn, 2009.A 3D Principal Component Analysis (PCA) of 123 isolates from three sites revealed that the B.bassiana populations were heterogeneous with obvious dominance.Futhermore, the causal source of the panzootic in Anhui was shown to be polyphyletic.The populations were homogenized into homogenous subunits for investigation of genetic structure by inter-simple sequence repeat (ISSR) markers.Variance was greater than 70%, largely due to genetic differences within populations and subpopulations.Genetic distances and genetic differentiation were negatively associated with geographic distances and it was speculated that this was due to the effects of monsoons and topography.Mantid isolates were divided into five pathotypes based on a two-way cluster analysis of genetic distance.Pathotype I consisted of the predominant subpopulations of Huangcangyu and Chashui populations, with a genetic distance of 0.120 and gene flow up to 1.833.This pathotype caused a widespread epizootic in north and southwest Anhui, while the other four pathotypes caused enzootics at all three investigation sites.The widespread epizootic and isolated enzootics composed the polyphyletic panzootic in Anhui.A strong gene flow between the two mantid species was identified in isolates, resulting in negligible gene differentiation.This indicated a lack of host specificity in mantid isolates of B.bassiana.