Diversity analysis of Bdellovibrio-and-like organisms from shrimp mariculture ponds in Zhanjiang wit

来源 :第七届全国微生物资源学术暨国际微生物系统与分类学研讨会 | 被引量 : 0次 | 上传用户:a345333488
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  [Objective] Bdellovibrio-and-like organisms(BALOs)are small-sized,parasitic bacteria which rely on other Gram-negative bacteria for survival.Our work aimed to characterize the community diversity of BALOs associated with the tropical shrimp ponds.[Methods] We collected water samples from eight shrimp mariculture ponds culturing Litopenaeus vannamei,in Zhanjiang,China,and extracted total DNA of thesamples.Then the 16S rRNA gene clone libraries were constructed following PCR amplification with BALOs family-specific primers.The community composition and structure of BALOs were further analyzed based on phylogenetic analysis.[Results] A total of 726 and 664 valid clones were obtained from the 16S rRNA gene libraries of families Halobacteriovoracaceae and Peredibacteraceae,respectively.Subsequently,they were respectively grouped into 68 and 44 OTUs(operational taxonomic units)at 99.5%sequence similarity,and assigned into 37 and 28 clustersat 97%similarity.For the Halobacteriovoracaceae libraries,most clusters were so far uncultured with the exception of five members,which accounting for 43.5%clones.And the cultivable cluster Ⅸ and the uncultured cluster B28 were the first and second dominant ones respectively.For the Peredibacteraceae libraries,the cluster pal2 and the only cultivable cluster A3.12 were the first and second dominant ones respectively.Notably,the values of Shannon diversity indices of Halobacteriovoracaceae and Peredibacteraceae tend to be reversed with the change of salinity,but the total BALOs diversities among the eight shrimp ponds were similar.[Conclusion] The mariculture shrimp ponds in Zhanjiang harbor a high diversity of BALOs comprising of Halobacteriovoracaceae and Peredibacteraceae,and salinity affect their community structure and composition greatly.
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