PEDOT nanotubes were prepared by a template synthesis method. Based on our template, it was deduced that there are two successive processes in the formation of nanotubes. The first step is soakage of the porous templates by a polymer solution, and the second step is adsorption of free charged cationic groups and doped PEDOT onto the template surface with negative charges. XRD results showed that well orientated PEDOT chains were formed during the synthesis, moreover the arrange conductivity of molecular chains strongly affect the structures of PEDOT nanotubes. The nanotubes were measured to be about 5.5-17.6 S/cm, which is higher than that of nanotube pellet due to the high contact resistance between the adjacent nanotubes.