Curcuminoid difluoroboron has attractive performance as a promising near-infrared(NIR) fluorescent dye. In this contribution, we designed and synthesized a mitochondria-targeted NIR fluorescent probe DFB1 based on difluoroboron curcuminoid scaffold for the detection of Cys(cysteine). DFB1 employs a curcumin analog as the NIR fluorophore, an acrylate group containing a, b-unsaturated ketone as a functional trigger moiety for Cys, and a triphenylphosphonium(TPP) cation moiety for specifically targeting mitochondria. The remarkable shift of DFB1 with Cys was observed from 470 nm to 590 nm in absorption spectra and from 560 nm to 680 nm in emission spectra. Notably, DFB1 manifests significantly dual-channel and turn-on NIR fluorescent signals simultaneously in response to Cys concentration,which make it favorable for monitoring endogenous Cys activity in vivo. This probe has high sensitivity and selectivity for the detection of Cys over homocysteine(Hcy) and glutathione(GSH). This specific response for Cys was based on differences kinetics of intramolecular adduct/cyclizations. More importantly, biological experiments indicated that this probe could be utilized for the detection of endogenous mitochondrial Cys in living cells. Curcuminoid difluoroboron has attractive performance as a near-infrared (NIR) fluorescent dye. In this contribution, we designed and synthesized a mitochondria-targeted NIR fluorescent probe DFB1 based on difluoroboron curcuminoid scaffold for the detection of Cys (cysteine). DFB1 employs a curcumin analog as the NIR fluorophore, an acrylate group containing a, b-unsaturated ketone as a functional trigger moiety for Cys, and a triphenylphosphonium (TPP) cation moiety for specifically targeting mitochondria. The remarkable shift of DFB1 with Cys was observed from 470 nm to 590 nm in absorption spectra and from 560 nm to 680 nm in emission spectra. Notably, DFB1 manifests significantly dual-channel and turn-on NIR fluorescent signals simultaneously in response to Cys concentration, which make it favorable for monitoring endogenous Cys activity in vivo . This probe has high sensitivity and selectivity for the detection of Cys over homocysteine ​​(Hcy) and glutathione (GSH). This specific response for Cys was based on differences kinetics of intramolecular adduct / cyclizations. More Importantly, biological experiments indicated that this probe could be utilized for the detection of endogenous mitochondrial Cys in living cells.