A motor-driven linkage system with links fabricated from 3-dimensional braided composite materials was studied. A group of coupling dynamic equations of the system, including composite materials parameters, electromagnetism parameters of the motor and structural parameters of the link mechanism, were established by finite element method. Based on the air-gap field of non-uniform airspace of three-phase alternating current motor caused by the vibration eccentricity of rotor, the relation of electromechanical coupling at the actual running state was analyzed. And the motor element, which defines the transverse vibration and torsional vibration of the motor as its nodal displacement, was established. Then, based on the damping element model and the expression of energy dissipation of the 3-dimentional braided composite materials, the damping matrix of the system was established by calculating each order modal damping of the mechanism.