Flow corridors are a new class of trajectory-based airspace which derives from the next generation air transportation system concept of operations. Reducing the airspace complexity and increasing the capacity are the main purposes of the en-route corridor. This paper analyzes the collision risk-capacity tradeoff using a combined discrete–continuous simulation method. A basic two-dimensional en-route flow corridor with performance rules is designed as the operational environment. A second-order system is established by combining the point mass model and the proportional derivative controller together to simulate the self-separation operations of the aircrafts in the corridor and the operation performance parameters from the User Manual for the Base of Aircraft Data are used in this research in order to improve the reliability. Simulation results indicate that the aircrafts can self-separate from each other efficiently by adjusting their velocities,and rationally setting the values of some variables can improve the rate and stability of the corridor with low risks of loss of separation. Flow corridors are a new class of trajectory-based airspace which derives from the next generation air transportation system concept of operations. Reducing the airspace complexity and increasing the capacity are the main purposes of the en-route corridor. This paper analyzes the collision risk- capacity tradeoff using a combined discrete-continuous simulation method. A basic two-dimensional en-route flow corridor with performance rules is designed as the operational environment. A second-order system is established by combining the point mass model and the proportional derivative controller together to simulate the self-separation operations of the aircrafts in the corridor and the operation performance parameters from the User Manual for the Base of Aircraft Data are used in this research in order to improve the reliability. Simulation results indicate that the aircrafts can self-separate from each other efficiently by adjusting their velocities, and rationally setting the values ​​of some variables can improve the rate and stability of the corridor with low risks of loss of separation.