With the approach of the second water storage of the Three Gorges Project, urban migration has become a great concern. However, being influenced by economical, social or other factors, ecological problems have apparently become pressing. All these problems are exerting great impact upon the speed and quality of new citys or towns construction. By means of ecology, urban ecology, landscape ecology,human settlement science as well as the principle of sustainable development, this paper analyzes the ecological problems in urban migration, and the corresponding approaches in order to promote ecological environment construction of new cities and give an impetus to sustainable development of the whole human settlements in the Three Gorges Reservoir Region.