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Ionic liquid (1-ethyl-3-methylimidazolium tetrafluoroborate, 1E-3MI-TFB) and HP-β-CD as modifier was added to the buffer to separate hyperoside, luteolin and chlorogenic acid.Experiments explored the effect of concentration of 1E-3MI-TFB and HP-β-CD on separation.The results indicated that 1.0 mmol/L HP-β-CD and 1‰ (v/v) 1E-3MI-TFB added to the buffer simultaneous y could achieve a good compromise of resolution and analysis time. Capillary experiments and UV spectra indicated that there was interaction between 1E-3MI-TFB and analytes.