Dynamic equations were developed for heterogeneous phase-transition in a system of coupled nucleation, growth and ripening. Based on these equations, a self-organized origin of small-scale nesting rhythmic beddings in Pahzhihua lithosomes was investigated and the results showed that the beddings could be formed by the cross supersaturated nucleation-crystallization of augite and feldspar successively. This process could be implemented by coupling with supersaturated nucleation, Ostwald ripening, component diffusion and the primary grain diffusion under a proper temperature gradient. The slightly intensive supersaturated nucleation and Ostwald ripening occurring in Panzhihua lithosomes may relate closely to the mineral components such as V-Ti-Magnetite.