Support vector machine for SAR/QSAR of phenethyl-amines

来源 :Acta Pharmacologica Sinica | 被引量 : 0次 | 上传用户:zhai4053
下载到本地 , 更方便阅读
声明 : 本文档内容版权归属内容提供方 , 如果您对本文有版权争议 , 可与客服联系进行内容授权或下架
论文部分内容阅读
Aim:To discriminate 32 phenethyl-amines between antagonists and agonists,and predict the activities of these compounds.Methods:The support vectormachine (SVM) is employed to investigate the structure-activity relationship(SAR)/quantitative structure-activity relationship (QSAR) of phenethyl-aminesbased on molecular descriptors.Results:By using the leave-one-out cross-vali-dation (LOOCV) test,1 optimal SAR and 2 optimal QSAR models for agonists andantagonists were attained.The accuracy of prediction for the classification ofphenethyl-amines by using the LOOCV test is 91.67%,and the accuracy of predic-tion for the classification of phenethyl-amines by using the independent test is100%;the results are better than those of the Fisher,the artificial neural network(ANN),and the K-nearest neighbor models for this real world data.The RMSE(root mean square error)of antagonists’ QSAR model is 0.5881,and the RMSE ofagonists’ QSAR model is 0.4779,which are better than those of the multiple linearregression,partial least squares,and ANN models for this real world data.Conclusion:The SVM can be used to investigate the SAR and QSAR of phenethyl-amines and could be a promising tool in the field of SAR/QSAR research. Aim: To discriminate 32 phenethyl-amines between antagonists and agonists, and predict the activities of these compounds. Methods: The support vector machinery (SVM) is employed to investigate the structure-activity relationship (SAR) / quantitative structure-activity relationship (QSAR) of phenethyl-aminesbased on molecular descriptors. Results: By using the leave-one-out cross-vali-dation (LOOCV) test, 1 optimal SAR and 2 optimal QSAR models for agonists and antagonists were attained.The accuracy of prediction for the classification ofphenethyl -amines by using the LOOCV test is 91.67%, and the accuracy of predic-tion for the classification of phenethyl-amines by using the independent test is 100%; the results are better than those of the Fisher, the artificial neural network (ANN) , and the K-nearest neighbor models for this real world data. RMSE (root mean square error) of antagonists ’QSAR model is 0.5881, and the RMSE ofagonists’ QSAR model is 0.4779, which are better than those of the multiple linearr egression, partial least squares, and ANN models for this real world data. Conlusion: The SVM can be used to investigate the SAR and QSAR of phenethyl-amines and could be a promising tool in the field of SAR / QSAR research.
其他文献
走进吉林市和·慢悦生活馆,总能看到创始人、总经理石婷玉忙碌的身影,每天她都会接待一批又一批的客人。来她馆里的客人,看重的是这里满墙典雅的绿色植物与娇艳欲滴的特制保
翻翻日历,发现5月里竟然有两个小长假,这气候宜人、“草长莺飞”之即,正是驾车游历祖国大好河山的好时节。要去爬山,难免要走山路,山路一般临崖靠涧,道路坡长弯急,穿洞过桥,
38了解轮胎尺寸标识好车主指数★★★★轮胎上的字母和数字太多了,都要写满了,看一眼就晕,本刊曾做过轮胎专题,对它上面的标识进行了详解。轮胎标识可能是汽车部件中最为复杂
Aim:To purify and characterize the coagulant protein FIa from Daboia russellisiamensis (Myanmar) venom.Methods:FIa was purified from Daboia russellisiamensis (
汽车设计上名称很贫乏,我都不知道怎么会如此的,车的形状叫做line,简单的加上edge,soft等等形容词,就是一个风格运动,有时候都觉得简陋到名词寒碜的地步,不知道为什么设计师
本文通过研究视觉思维理论提取视觉观物的过程,分析观者对产品造型的视觉作用机制,总结出解读产品造型的三个阶段,使设计者能更好地通过产品造型语言与观者进行互动,并以SK6
防锈及金属加工油(液)的研究和应用是目前先进制造技术中的热点。随着新技术新工艺的迅速涌现,新世纪防锈润滑技术将倍受重视。为了促进防锈润滑技术的进步和发展,全国金属与非金
在油田注水过程中,水的不相容性会造成地层结垢。本文研究了油田注水地层结垢的化学防治技术,并根据矿场应用实例,对其效果进行了评价和分析。 During water flooding in the o
看了太多新媒体的文字,有时会担心,对于文字最起码的敬畏、审美和责任感,会在我们这个时代丢失。这几年,“理客中”这个词及其背后所代表的一种思维习惯,逐渐成为了一个贬义