Stability related to theoretical model for catastrophic weather prediction,which includes non-hydrostatic perfect elastic model and anelastic model, is discussed and analyzed in detail. It is proved that non-hydrostatic perfect elastic equations set is stable in the class of infinitely differentiable function. However, for the anelastic equations set, its continuity equation is changed in form because of the particular hypothesis for fluid, so "the matching consisting of both viscosity coefficient and incompressible assumption" appears, thereby the most important equations set of this class in practical prediction shows the same instability in topological property as Navier-Stokes equation,which should be avoided first in practical numerical prediction. In light of this, the referenced suggestions to amend the applied model are finally presented.