,Global Co-transcriptional Splicing in Arabidopsis and the Correlation with Splicing Regulation in M

来源 :分子植物(英文版) | 被引量 : 0次 | 上传用户:xbmkdx
下载到本地 , 更方便阅读
声明 : 本文档内容版权归属内容提供方 , 如果您对本文有版权争议 , 可与客服联系进行内容授权或下架
论文部分内容阅读
RNA splicing and spliceosome assembly in eukaryotes occur mainly during transcription.However,co-transcriptional splicing has not yet been explored in plants.Here,we built transcriptomes of nascent chromatin RNAs in Arabidopsis thaliana and showed that nearly all introns undergo co-transcriptional splicing,which occurs with higher efficiency for introns in protein-coding genes than for those in noncoding RNAs.Total intron number and intron position are two predominant features that correlate with co-transcriptional splicing efficiency,and introns with altative 5’or 3’splice sites are less efficiently spliced.Furthermore,we found that mutations in genes encoding trans-acting proteins lead to more introns with increased splicing defects in nascent RNAs than in mature RNAs,and that introns with increased splicing defects in mature RNAs are inefficiently spliced at the co-transcriptional level.Collectively,our results not only uncovered widespread co-transcriptional splicing in Arabidopsis but also identified features that may affect or be affected by co-transcriptional splicing efficiency.
其他文献
The molecular links between extracellular signals and the regulation of localized protein synthesis in plant cells are poorly understood.Here,we show that in Ar
湖南省棉科所肖时德副研究员选育的低酚棉新品种——湘棉11号,最近荣莸1990年度国家科技发明四等奖。湘棉11号(原名湘无74)是肖时德副研究员1975年用布兰柯无毒棉与湘73杂交
协商对话,领导干部和群众面对面地就改革和开放,国家经济建设和人民生活等问题,交谈意见,取得相互理解和信任,共同搞好改革、开放,搞好我们国家的社会主义经济建设,已被近年
Speciation has long been regarded as an irreversible process once the reproductive barriers had been established.However,unlike in natural populations,artificia
A network inference problem focuses on discovering the structure of a diffusion network from observed cascades.This problem is significantly more challenging in
The rubber tree,Hevea brasiliensis,produces natural rubber that serves as an essential industrial raw material.Here,we present a high-quality reference genome f
The phytohormone abscisic acid (ABA) plays pivotal roles in triggering stomatal closure and facilitating adaptation of plants to drought stress.Hydrogen sulfide
本文以增城市朱村镇农用地土壤为研究对象,在调查采样和分析测试的基础上,借助地理信息系统和地统计学软件,探讨己知调查样点重金属含量的半方差函数图及其拟合模型,对农用地土壤
鲁玉10号(8112×H_(21))系莱阳农学院培育的广适、多抗、中早熟、紧凑型新玉米优良品种。其父本H_(21)也是该院用“黄早四×H_(84)”作为基本材料自交分离选育而成。1989年
The shift of dark-grown seedlings into light causes enormous transcriptome changes followed by a dramatic developmental transition.Here,we show that microRNA (m