Based on the improved interaction mechanism of two-layer model, this paper proposed Pixel Component Arranging and Comparing Algorithm (PCACA) and theoretically positioning algorithm, estimated the true temperature of mixed pixel in four extreme points in combination with the measurements of dry and wet points in calibration fields and improved the reliability of positioning dry and wet line. A new two-layer energy-separation algorithm was proposed,which was simple and direct without resistance network parameters for each pixel. We also proposed a new thought about the effect of advection. The albedo of mixed pixel was also separated with PCACA. In combination with two-layer energy-separation algorithm, the net radiation of mixed pixel was separated to overcome the uncertainty of conventional energy-separation algorithm using Beer's Law. Through the validation of retrieval result, this method is proved to be feasible and operational. At the same time, the uncertainty of this algorithm was objectively analyzed.