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The growth processes of Microcystis aeruginosa (FACHB-41) in simulated Taihu Lake water with different phosphorus concentrations were investigated using laboratory microcosms. The algal biomass increased with the increase of phosphorus concentration when it was lower than 0.445 mg/L, while the dissolved oxygen(DO) and pH increased, dissolved inorganic nitrogen(DIN) and light intensity underwater(I) decreased. Responding to the changes of the environmental factors, the cellular carbohydrate and its ratio to cellular protein decreased generally as phosphorus increased. However, when phosphorus concentration was higher than 1.645 mg/L, the biomass, the environmental factors, the cellular carbohydrate and its ratio to cellular protein did not change likewise.Since the environmental factors and the physiological and biochemical responses are important factors, the change of environmental factors and cell physiology and biochemistry induced by phosphorus may become the key factors that steer the growth and dominance of Microcystis under certain conditions. To sum up, phosphorus not only stimulate the growth of Microcystis directly by supplying nutrient element, but also has complex interactions with other environmental factors and play important roles in the growth processes of Microcystis .