Molecular mechanism investigation of carboxylesterase rPPE based on molecular dynamic simulation

来源 :第六届全国生物信息学与系统生物学学术大会暨国际生物信息学前沿研讨会 | 被引量 : 0次 | 上传用户:jackzhao1
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  Background: A recombinant carboxylesterase, cloned from Pseudomonas putidaand designated as rPPE, is capable of catalyzing the bioresolution of racemic 2-acetoxy-2-(2-chlorophenyl)acetate (rac-AcO-CPA) with excellent enantioselectivity.Rational design of the enzyme shows that the variant W187H could increase the activity by ~100-fold comparedto the wild type (WT).As the crystal structures of Apo-rPPE and rPPE in complex with (S)-AcO-CPA were resolved recently, we can carry out molecular dynamic simulations to gain more insights into the molecular mechanism regarding ligand recognition and catalytic efficiency of the carboxylesterase rPPE.
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