Noncoding RNA Identification based on Topology Secondary Structure and Reading Frame in Organelle Ge

来源 :第七届全国生物信息学与系统生物学学术大会 | 被引量 : 0次 | 上传用户：john0620

【摘要】

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【作者】

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武成艳赵建军李前忠

【机构】

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包头师范学院物理科学与技术学院,包头014010;内蒙古大学物理科学与技术学院,呼和浩特010021

【出处】

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第七届全国生物信息学与系统生物学学术大会

【发表日期】

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2016年8期

【关键词】

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Noncoding RNA Organelle genomes Open reading frame Topological secondary structu

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　　Non-coding RNA (ncRNA) genes make transcripts as same as the encoding genes,and ncRNAs directly function as RNAs rather than serve as blueprints for proteins.As the function of ncRNA is closely related to organllie genomes,it is desirable to explore ncRNA function by confirming its provenance.Based on the experimental data,a ncRNAs dataset with less than 80% sequence identity (ncRNA_361)[1]for different organelle genomes is built from NONCODE v3.0[2].The ncRNA sequences from the four kinds of organllie genomes are recognized by using the improved K-minimum increment of diversity classifier (iK-MID) algorithm based on the features from the topology secondary structure and reading frames.

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