,Profiling and bioinformatics analysis of differentially expressed circular RNAs in human interverte

来源 :生物化学与生物物理学报(英文版) | 被引量 : 0次 | 上传用户:zldzhang
下载到本地 , 更方便阅读
声明 : 本文档内容版权归属内容提供方 , 如果您对本文有版权争议 , 可与客服联系进行内容授权或下架
论文部分内容阅读
The functional changes of nucleus pulposus (NP) cells are considered to be the initiating factors of intervertebral disc degeneration (IDD),and the differentially expressed circRNAs in NP cells may play an important role in the process of IDD.To identify circular RNAs (circRNAs) associated with human IDD,we isolated the NP cells from human degenerated and non-degenerated intervertebral disc and identified NP cells by microscopy and cell proliferation.CircRNA microarray expression profiles were obtained from NP cells of degenerated and non-degenerated intervertebral disc and further validated by quantitative reverse transcription PCR (qRT-PCR).The expression data were analyzed by bioinformatics.Microarray analysis identified 7294 circRNAs differentially expressed in degenerated human IDD NP cells.Among them,3724 circRNAs were up-regulated and 3570 circRNAs were down-regulated by more than 2 folds.After validating by qRT-PCR,we predicted the possible miRNAs of the top dysregulated circRNAs using TargetScan,and miRanda.Furthermore,Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analysis showed that the most modulated circRNAs regulate the viability,degradation,apoptosis and oxidative stress in NP cells,and the possible mechanism underlying IDD was discussed.These results revealed that circRNAs may play a role in IDD and might be a promising candidate molecular target for gene therapy.
其他文献
In the current study,we aimed to investigate the effects of miR-155 on CD4+ T cell-mediated immune response in the pathogenesis of atherosclerosis.CD34+ hematop
Diabetic foot ulcer (DFU) is one of diabetic complications,which is frequently present and tormented in diabetes mellitus.Most multipotent mesenchymal stromal c
LncRNA NEF has been proved to be a tumor suppressor in liver cancer.In the present study,we found that IncRNA NEF was downregulated and miRNA-155 was upregulate
Metastasis is the main cause of death in patients with colorectal cancer (CRC),but the molecular mechanism is not yet fully understood.Previous studies have sho
本文结合实际情况,介绍了几种通信接入方式:ADSL、光纤接入、无线接入,论述了这几种接入方式的优缺点及适用情况。 In this paper, several kinds of communication access
Contact inhibition adjusts organ size to the proper size and ensures the cultured cells growing to a monolayer.By regulating the downstream coordinator YAP,the
Biomineralization,especially shell formation,is a sophisticated process regulated by various matrix proteins.Pinctada fucata chitinase-like protein 1 (Pf-Clp1),
Human group IB phospholipase A2 (IB-PLA2) and its zymogen (proIB-PLA2) were purified from E. coli. Refolding was carried out by diluting the denatured forms of
Homeobox c6 (Hoxc6) affects the proliferation,migration,and infiltration of malignant tumor cells;however,the effect of Hoxc6 on atherosclerosis (AS) as well as
本文以红星和富士(Malus×Domestica Borkh)果实为材料,利用瞬时表达技术,鉴定了MdHIR2、MdHIR4和MdJAZ2在花青苷合成调控中的的功能。主要结果如下:1.MdDAZ2基因抑制苹果果皮