According to the geological and seismic reflection data of the Chinese Continental Scientific Drilling (CCSD) main-hole (MH), and the anomalies of CH4, CO2, and He are correlated to the three-component seismic reflectors, especially in horizontal component profiles. However, the seismic response is dif-ficult to be explained as the porosity of crystalline rocks is only about 1% in well section where the gas anomalies occur. Seismic velocity measurement of the MH cores indicated that compared with wa-ter-saturated rock samples, seismic velocity (especially the S-wave) could be distinctly decreased by gas contained in tiny cracks despite of the low porosity, and then notable seismic response could be induced in gas-filled crystalline rocks. It could be predicated that if the porosity of certain rocks in the middle crust rose due to water-rock interaction and had natural gas filled, then there would be more probability for natural gas in top of the mid-crust to fill in the crystalline rocks with increased porosity. In such case, based on the decrease of Swave velocity in crystalline rocks, seismic method could be applied in the future to explore natural gas reservoirs in the middle crust. According to the geological and seismic reflection data of the Chinese Continental Scientific Drilling (CCSD) main-hole (MH), and the anomalies of CH4, CO2, and He are correlated to the three-component seismic reflectors, especially in horizontal component profiles. However, the seismic response is dif-ficult to be explained as the porosity of crystalline rocks is only about 1% in well section where the gas anomalies occur. Seismic velocity measurement of the MH cores indicated that compared with wa-ter-saturated rock samples , seismic velocity (especially the S-wave) could be distinctly decreased by gas contained in tiny cracks despite of the low porosity, and then not able seismic response could be induced in gas-filled crystalline rocks. It could be predicated that if the porosity of certain rocks in the middle crust rose due to water-rock interaction and had natural gas filled, then there would be more probability for natural gas in top of the mid-crust to fill in the crystalline roc ks with increased porosity. In such case, based on the decrease of Swave velocity in crystalline rocks, seismic method could be applied in the future to explore natural gas reservoirs in the middle crust.