We propose a deviation model and study the influences of the relative error and sensitivity of a machine on the transmission coefficients (TCs) of Fibonacci superlattices. It is found that for a system with fewer layers, the influence of deviation can be ignored. When superlattices become more complicated, they may be fabricated by a machine with suitable relative error and possess the designed value of TC. However, when the number of system layers exceeds some critical value, superlattices should be manufactured only by precise machines. The influence of the sensitivity is also discussed.