Observation of intramolecular conformational dynamics of SNARE-Protein Ykt-6 using smFRET-FCCS

来源 :中国化学会第三届全国生物物理化学会议暨国际华人生物物理化学发展论坛 | 被引量 : 0次 | 上传用户:bvhd5467h
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  Soluble N-ethylmaleimide sensitive factor attachment protein receptors (SNAREs) realize a central task in exocytotic and vacuolar trafficking pathways by implementing compartment-specific membrane fusion processes.Different from the bona fide type Ⅱ majority of SNARE-proteins containing a proteinaceous membrane linkage the chosen Ykt6 cycles between an inactive cytosolic and an active membrane-anchor-associated state.Starting from the closed cytosolic farnesylated condition a palmitoylation of the Ykt6 leads to a conformational change resulting in a stable membrane attachment,which is controlled by the interacting of the N-terminal domain and the SNARE motif influenced by the presence of shielding lipids.Single-molecule F(o)rster Resonance Energy Transfer (smFRET) combined with Fluorescence Correlation Spectroscopy (FCS) asserts as powerful techniques depicting intramolecular time-dependent conformational changes.Two-dye-labeling of proteins enable probing of distribution of conformational states.Furthermore,Auto-and Crosscorrelation analysis allow us to investigate protein dynamics on different time scales.In this work,we double-labeled a rat rYkt6-E175C-mutant with a suitable FRET pair to study the conformational state distribution in a vesicle-based smFRET-Setup and to observe confonnational dynamics between inactive and active states in a Fluorescence Cross Correlation Spectroscopy Setup (FCCS).
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