The abundance curves derived from area proportions of brachiopods and Girvanella in the thin sections from the Yangdi section, South China, exhibits complex relationships during the Late Devonian Frasnian-Famennian transition. The living activity of brachiopods such as grazing and borrowing did great damage to the growth of Girvanella. However, there was more to just a mere a survival competing relationship between them, Girvanella actually improved marine environments by oxygenating the dysoxic ambient sea-water through photosynthesis in the lower Kellwasser Horizon. Profited from this improvement brachiopods’ abundance increased subsequently and suppressed Girvanella again. Nonetheless, without Girvanella’s photosynthesis, brachiopods were wiped out by the farther anoxic environments in the upper Kellwasser Horizon. The complex relationships between Girvanella and brachiopods may be a key to unlocking the relationships between geomicrobes and metazoans in the geological overturn periods. The abundance curves derived from area proportions of brachiopods and Girvanella in the thin sections from the Yangdi section, South China, exhibits complex relationships during the Late Devonian Frasnian-Famennian transition. The living activity of brachiopods such as grazing and borrowing did great damage to the growth of Girvanella. However, there was more to just a mere a survival competing relationship between them, Girvanella actually improved marine environments by oxygenating the dysoxic ambient sea-water through photosynthesis in the lower Kellwasser Horizon. and suppressed Girvanella again. Nonetheless, without Girvanella’s photosynthesis, brachiopods were wiped out by the farther anoxic environments in the upper Kellwasser Horizon. The complex relationships between Girvanella and brachiopods may be a key to unlock the relationships between geomicrobes and metazoans in the geological overturn peri ods.