Fine mapping of a major quantitative trait locus associated with seeds per silique in Brassica napus

来源 :第十九届国际十字花科遗传学会及芸薹属2014年年会 | 被引量 : 0次 | 上传用户:a15few512
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  Seeds per silique(SS)is one of the three important components of yield in oilseed rape(Brassica napus L.); however,the genetic architecture of this trait remains largely unclear.In this study,a F1 plant derived from two inbred lines differing in seeds per silique were used to generate 180 double haploid lines.QTL scanning based on this DH population indicated that a major QTL,qSS.C9,was located on the C9 chromosome.Near-isogenic lines(BC3F2)for qSS.C9 was then produced by successively backcrossing the high SS parent Y106 with the recurrent parent HZ396.A total of 152 BC3F2 plants and their parents were evaluated for SS.A Chi-square test showed that the ratio of the frequency distribution follows a the Mendelian segregation ratio of 3:1(x2= 0.355,P>0.05),suggesting that only one locus is responsible for the SS variation in the BC3F2 population.QTL analysis further confirmed that qSS.C9 explaining 85.8%of phenotypic variance with additive and dominant effects of 6.1 and 5.7 SS,respectively,was located between the markers SRC9-022 and SCC9-005.The other two SSR markers(SRC9-27 and SRC9-298)closely linked to qSS.C9 were identified by using high-SS and low-SS bulks,and further explored to precisely map the qSS.C9 by assaying 2,058 extremely low SS plants from a BC4F2 population.Comparative mapping between B.napus,B.rapa and B.oleracea showed that the qSS.C9 candidate region restricted by SRC9-27 and SRC9-298 corresponds to a 140 kb physical interval on B.rapa chromosome A10 but a 267kb physical interval on B.oleracea chromosome C9.According to the B.oleracea Database,fourty-two coding genes were predicted in this region.Comparative sequence analysis between parental lines showed that two genes would be likely the candidate genes of qSS.C9.
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