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Morinda L.(Rubiaceae)contains approximately 80-100 species,many of which are famous local medical plants.However,the survival of the natural populations of these species are always threatened by excessive collections,calling for widely scientific attentions.M.officinalis is,known as one the four medicine plants in South China,becomes extinct in the natural environments.In this study,we present the first transcriptome analysis of M.officinalis using the Illumina sequencing technology.