论文部分内容阅读
采用HGVNS5特异的2对引物,对两个香港株和一个广东株HGVRNA进行逆转录套式PCR扩增,PCR产物克隆入pUC19,重组质粒转化DH5α和JM109菌株。PCR和酶切法鉴定阳性克隆,双脱氧链末端终止法测定核苷酸序列并进行同源性分析。结果发现核苷酸变异呈散在分布,三株间核苷酸和氨基酸序列同源性分别为93.3%~94%及97%~99.2%,与已报道的中国株(CN)相比,则同源性分别为90%~91.2%和94%~96.3%,与美国株(PNF2161及R10291)相比,为87.1%~89.5%和95.2%~97%,而与西非株(GBVC)相比,则达91.4%~93.8%和97%~97.9%。提示HGVNS5区核苷酸和氨基酸序列相对保守,不同HGV株存在一定的地区差异。
Two HGVNS5-specific primers were used to amplify the HGVRNA of two Hong Kong strains and one Guangdong strain. The PCR products were cloned into pUC19 and the recombinant plasmids were transformed into DH5α and JM109 strains. The positive clones were identified by PCR and restriction enzyme digestion. The nucleotide sequences were determined by dideoxy chain termination and analyzed by homology. The results showed that the nucleotide variation was scattered. The nucleotide and amino acid sequence identities of the three strains were 93.3% ~ 94% and 97% ~ 99.2%, respectively. Compared with the reported CN strain The homology was between 90% and 91.2% and 94% and 96.3% respectively, which was 87.1% -89.5% and 95.2% compared with that of the American strain (PNF2161 and R10291) ~ 97% compared with that of West Africa strain (GBV-C), reaching 91.4% ~ 93.8% and 97% ~ 97.9%. Suggesting that the nucleotide and amino acid sequences of HGVNS5 region are relatively conservative, and there are some regional differences in different HGV strains.