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Climate change is an issue of major concern nowadays. Its impact on the natural and human environment is studied intensively, as the expected shift in climate will be significant in the next few decades. Recent experience shows that the effects will be critical in coastal areas, resulting in erosion and inundation phenomena worldwide. In addition to that, coastal areas are subject to"pressures"from upstream watersheds in terms of water quality and sediment transport. The present paper studies the impact of climate change on sediment transport and morphology in the aforementioned coupled system. The study regards a sandy coast and its upstream watershed in Chalkidiki, North Greece; it is based on: (a) an integrated approach for the quantitative correlation of the two through numerical modeling, developed by the authors, and (b) a calibrated application of the relevant models Soil and Water Assessment Tool (SWAT) and PELNCON-M, applied to the watershed and the coastal zone, respectively. The examined climate change scenarios focus on a shift of the rainfall distribution towards fewer and more extreme rainfall events, and an increased frequency of occurrence of extreme wave events. Results indicate the significance of climatic pressures in wide-scale sediment dynamics, and are deemed to provide a useful perspective for researchers and policy planners involved in the study of coastal morphology evolution in a changing climate.